Jodi L Bubenik

Jodi L Bubenik,

Assistant Scientist (faculty)

Department: Molecular Genetics & Microbiology
Business Phone: (352) 273-8156
Business Email: jbubenik@ufl.edu

Publications

2022
Myotonic dystrophy type 1 embryonic stem cells show decreased myogenic potential, increased CpG methylation at the DMPK locus and RNA mis-splicing.
Biology open. [DOI] 10.1242/bio.058978. [PMID] 35019138.
2021
Generation of a Novel SARS-CoV-2 Sub-genomic RNA Due to the R203K/G204R Variant in Nucleocapsid: Homologous Recombination has Potential to Change SARS-CoV-2 at Both Protein and RNA Level.
Pathogens & immunity. [DOI] 10.20411/pai.v6i2.460. [PMID] 34541432.
2021
Generation of a novel SARS-CoV-2 sub-genomic RNA due to the R203K/G204R variant in nucleocapsid: homologous recombination has potential to change SARS-CoV-2 at both protein and RNA level.
bioRxiv : the preprint server for biology. [DOI] 10.1101/2020.04.10.029454. [PMID] 33880475.
2020
RNA structure probing to characterize RNA-protein interactions on a low abundance pre-mRNA in living cells.
RNA (New York, N.Y.). [DOI] 10.1261/rna.077263.120. [PMID] 33310817.
2019
Cell-type-specific dysregulation of RNA alternative splicing in short tandem repeat mouse knockin models of myotonic dystrophy.
Genes & development. [DOI] 10.1101/gad.328963.119. [PMID] 31624084.
2018
STRring up Cancer with lncRNA.
Molecular cell. [DOI] 10.1016/j.molcel.2018.10.026. [PMID] 30388407.
2017
RAN Translation Regulated by Muscleblind Proteins in Myotonic Dystrophy Type 2.
Neuron. [DOI] 10.1016/j.neuron.2017.08.039. [PMID] 28910618.
2015
Differential Effects of Tra2ß Isoforms on HIV-1 RNA Processing and Expression.
PloS one. [DOI] 10.1371/journal.pone.0125315. [PMID] 25970345.
2014
Characterization of the UGA-recoding and SECIS-binding activities of SECIS-binding protein 2.
RNA biology. [DOI] 10.1080/15476286.2014.996472. [PMID] 25692238.
2013
Alternative transcripts and 3’UTR elements govern the incorporation of selenocysteine into selenoprotein S.
PloS one. [DOI] 10.1371/journal.pone.0062102. [PMID] 23614019.
2011
Identification of a signature motif for the eIF4a3-SECIS interaction.
Nucleic acids research. [DOI] 10.1093/nar/gkr446. [PMID] 21685449.
2009
Eukaryotic initiation factor 4a3 is a selenium-regulated RNA-binding protein that selectively inhibits selenocysteine incorporation.
Molecular cell. [DOI] 10.1016/j.molcel.2009.06.026. [PMID] 19716792.
2009
Known turnover and translation regulatory RNA-binding proteins interact with the 3′ UTR of SECIS-binding protein 2.
RNA biology. [PMID] 19106619.
2007
Altered RNA binding activity underlies abnormal thyroid hormone metabolism linked to a mutation in selenocysteine insertion sequence-binding protein 2.
The Journal of biological chemistry. [PMID] 17901054.

Grants

Feb 2017 – Jan 2020
Novel Mouse Knockin Models for Myotonic Dystrophy
Role: Other
Funding: MUSCULAR DYSTROPHY ASSO

Contact Details

Phones:
Business:
(352) 273-8156
Emails:
Business:
jbubenik@ufl.edu
Addresses:
Business Mailing:
PO Box 100245
GAINESVILLE FL 32610
Business Street:
2033 MOWRY RD
GAINESVILLE FL 32610